obitools (3.0.1~b26+dfsg-5) unstable; urgency=medium

  * Team upload.
  * cython3.patch: fix build failure with cython3. (Closes: #1119752)
  * cflags.patch: new: propagate missing CFLAGS. (Closes: #1119509)
  * d/{clean,rules}: repair the "clean" target. (Closes: #1047870)
  * d/triggers: new: ensure ldconfig execution after install.
  * no_cython_in_binary_package.patch: dep3 header.
  * d/watch: convert to v5 PyPI project scanner.
  * d/control: drop redundant Rules-Requires-Root: no.
  * d/control: declare compliance to standards version 4.7.2.

 -- Étienne Mollier <emollier@debian.org>  Tue, 04 Nov 2025 23:20:25 +0100

obitools (3.0.1~b26+dfsg-4) unstable; urgency=medium

  * Team upload.
  * Add patch to fix FTBFS with Python 3.13 as the default (Closes: #1092065).

 -- Stuart Prescott <stuart@debian.org>  Fri, 10 Jan 2025 23:52:37 +1100

obitools (3.0.1~b26+dfsg-3) unstable; urgency=medium

  * Team upload.
  * Install the shared library to the correct directory and remove the
    rpath.
  * Add a basic smoke autopkgtest
  * Improve cross-building
  * Add another smoke test
  * Add tutorial data and an autopkgtest using it.
  * d/control: new upstream doesn't have any docs to build. Remove
    remaining sphinx parts.
  * Added patch to fix running on Python3.12+.

 -- Michael R. Crusoe <crusoe@debian.org>  Thu, 21 Nov 2024 16:40:55 +0100

obitools (3.0.1~b26+dfsg-2) unstable; urgency=medium

  * Team upload.
  * d/control: new homepage
  * d/rules: don't try to run any tests, there aren't any.
  * Fixed non-root builds.

 -- Michael R. Crusoe <crusoe@debian.org>  Thu, 21 Nov 2024 01:09:03 +0100

obitools (3.0.1~b26+dfsg-1) unstable; urgency=medium

  * Team upload.
  * d/watch: switch to OBITools3
  * Deleted all patches except no_cython_in_binary_package.patch
  * copyright: update for missing file
  * d/control: needs cmake
  * d/control: switch to Cython 3.x
  * Added patch to enable building on any architecture.

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 20 Nov 2024 19:00:04 +0100

obitools (1.2.13+dfsg-9) unstable; urgency=medium

  [ Sudip Mukherjee ]
  * Use pickle to fix error with extractreads. (Closes: #1073586)

 -- Andreas Tille <tille@debian.org>  Thu, 20 Jun 2024 09:39:45 +0200

obitools (1.2.13+dfsg-8) unstable; urgency=medium

  * Team upload.
  * qsort.patch: new: replace heapsort by qsort. (Closes: #1066369)
  * d/control: declare compliance to standards version 4.7.0.

 -- Étienne Mollier <emollier@debian.org>  Sat, 20 Apr 2024 10:41:15 +0200

obitools (1.2.13+dfsg-7) unstable; urgency=medium

  * Drop cython3 dependency from binary package
    Closes: #1057995

 -- Andreas Tille <tille@debian.org>  Sun, 17 Dec 2023 20:52:01 +0100

obitools (1.2.13+dfsg-6) unstable; urgency=medium

  [ Bas Couwenberg ]
  * Switch to cython3-legacy.
    Closes: #1056824

  [ Andreas Tille ]
  * Standards-Version: 4.6.2 (routine-update)

 -- Andreas Tille <tille@debian.org>  Sun, 10 Dec 2023 11:55:11 +0100

obitools (1.2.13+dfsg-5) unstable; urgency=medium

  [ Andreas Tille ]
  * Team Upload.
  * Disable build package on i386 on Salsa CI
  * Disable blhc on Salsa CI

  [ Nilesh Patra ]
  * Add patch to fix FTBFS (Closes: #1022427)
  * Bump Standards-Version to 4.6.1 (no changes needed)

 -- Nilesh Patra <nilesh@debian.org>  Mon, 24 Oct 2022 12:08:04 +0530

obitools (1.2.13+dfsg-4) unstable; urgency=medium

  * Remove useless docs
  * Do not link to code documentation which is not installed any more
    Closes: #988858
  * Standards-Version: 4.6.0 (routine-update)
  * debhelper-compat 13 (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * watch file standard 4 (routine-update)
  * Close Python3 port bug since upstream is dead and our 2to3 port has not
    triggered any issue
    Closes: #935340

 -- Andreas Tille <tille@debian.org>  Tue, 14 Dec 2021 13:32:34 +0100

obitools (1.2.13+dfsg-3) unstable; urgency=medium

  [ Python3 port of obitools ]
  * Use 2to3 to port from Python2 to Python3
    Closes: #937177
  * Manual patch for cython related files

  [ Andreas Tille ]
  * Add debian/NEWS
  * Standards-Version: 4.5.0 (routine-update)
  * Add salsa-ci file (routine-update)

 -- Andreas Tille <tille@debian.org>  Sat, 07 Mar 2020 07:47:13 +0100

obitools (1.2.13+dfsg-2) unstable; urgency=medium

  * Apply patch by Olivier Sallou to work around bug at cleanup
    This also prevents creating sphinx documentation.
    Closes: #935287
  * Standards-Version: 4.4.1
  * Use secure URI in debian/watch.
  * Remove src/OBITools.egg-info in clean target to build twice in a row

 -- Andreas Tille <tille@debian.org>  Mon, 02 Dec 2019 12:17:04 +0100

obitools (1.2.13+dfsg-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Created with routine-update script
  * debhelper-compat 12
  * Standards-Version: 4.4.0
  * Build-Depends: s/python-sphinx/python3-sphinx/

 -- Steffen Moeller <moeller@debian.org>  Sat, 27 Jul 2019 13:11:02 +0200

obitools (1.2.12+dfsg-2) unstable; urgency=medium

  * Drop ecoPCR.1.gz and ecofind.1 from package
    Closes: #920359
  * Section: science

 -- Andreas Tille <tille@debian.org>  Mon, 28 Jan 2019 16:24:48 +0100

obitools (1.2.12+dfsg-1) unstable; urgency=low

  * Initial release (Closes: #783833)

 -- Andreas Tille <tille@debian.org>  Mon, 21 Jan 2019 21:25:12 +0100
