/*
    Theseus - maximum likelihood superpositioning of macromolecular structures

    Copyright (C) 2004-2009 Douglas L. Theobald

    This program is free software; you can redistribute it and/or modify
    it under the terms of the GNU General Public License as published by
    the Free Software Foundation; either version 2 of the License, or
    (at your option) any later version.

    This program is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU General Public License for more details.

    You should have received a copy of the GNU General Public License
    along with this program; if not, write to the:

    Free Software Foundation, Inc.,
    59 Temple Place, Suite 330,
    Boston, MA  02111-1307  USA

    -/_|:|_|_\-
*/

#ifndef LODMATS_SEEN
#define LODMATS_SEEN

extern const char aa1[];
extern const char aa3[];
extern const char aan1[];
extern const char aan3[];
extern const char ss1[];
extern const double aafreq_blosum50[20];
extern const double s_dssp8[8][8];
extern const double s_simple[20][20];
extern const double s_simpler[20][20];
extern const double s_hsdm[20][20];
extern const double s_blosum30[20][20];
extern const double s_blosum35[20][20];
extern const double s_blosum40[20][20];
extern const double s_blosum50[20][20];
extern const double s_blosum62[20][20];
extern const double s_blosum100[20][20];

#endif
