/**************************************************************************
 *
 * Copyright (c) 2004-2008, J. Craig Venter Institute. All rights reserved.
 *
 * This file is part of TraceTuner, the DNA sequencing quality value,
 * base calling and trace processing software.
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received (LICENSE.txt) a copy of the GNU General Public
 * License along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
 *************************************************************************/

/* 
 * Btk_process_indels.h 
 *
 */

extern int 
Btk_process_indels(char *path, int *, int **, char *, int *qvs,
    Data *, ReadInfo *, ContextTable *, Options , BtkMessage *);

