# This file is part of the massXpert project.

# The "massXpert" project is released ---in its entirety--- under the
# GNU General Public License and was started (in the form of the GNU
# polyxmass project) at the Centre National de la Recherche
# Scientifique (FRANCE), that granted me the formal authorization to
# publish it under this Free Software License.

# Copyright (C) 2006,2007 Filippo Rusconi

# This is the modification_dictionary file where the correspondences
# between the name of each modification and their graphic file (pixmap
# file called "image") used to graphicallly render them in the
# sequence editor are made. Also, the graphical operation that is to
# be performed upon chemical modification of a monomer is listed ('T'
# for transparent and 'O' for opaque). See the manual for details.

# The format of the file is like this :
# -------------------------------------

# Phosphorylation%T%phospho.svg

# where Phosphorylation is the name of the modification. T indicates
# that the visual rendering of the modification is a transparent
# process (O indicates that the visual rendering of the modification
# is a full image replacement 'O' like opaque). phospho.svg is a
# resolution-independent svg file.

# Each line starting with a '#' character is a comment and is ignored
# during parsing of this file. 

# This file is case-sensitive.

Phosphorylation%T%phospho.svg
Sulphation%T%sulpho.svg
AmidationAsp%O%asparagine.svg
Acetylation%T%acetyl.svg
Glutamylation%T%glutamylation.svg
Glycylation%T%glycylation.svg
AmidationGlu%O%glutamine.svg
Oxidation%T%oxidation.svg
SulfideBond%T%sulfbond.svg
ProtonLoss%T%protonloss.svg
Hydroxylation%T%hydroxylation.svg

